Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949425.1_cds_XP_016490324.1_80755
CDS Infomation

[gene=LOC107810100] [db_xref=GeneID:107810100] [protein=mannan endo-1,4-beta-mannosidase 2-like] [protein_id=XP_016490324.1] [location=complement(join(23438..23846,23975..24186,25182..25304,26088..26285,26969..27349))] [gbkey=CDS]
Sequence

ATGGTTAAATCATCTATGAGCAGAATGTTAGCAGGAAATGGCTTATTTTATCCAATTATT
GGGTTTGCATCATTTATTGCTTTCCTATATTTGTCCTTTGGGGACTTGTGGGTTAATTAC
AGTAAAGAAATAAATCTCAGTTTTGTGGAGAGGAATGGGACTCAGTTCTATGTTGATGGT
AAAGTTTTTTACGTAAATGGATGGAATTCTTATTGGTTAATGGATCATGCTGCTGATTAT
AGTACGAGACCAAGAATTAGAACTATGCTTCAAGCTAGTGCAAAGATGGGTCTTACTGTT
TGTAGAACTTGGGCTTTCAATGATGGTGGTTACAATGCTCTCCAGATTTCCCCTGGAAAA
TTTGATGAAAAAGTGTTCAGGGCATTGGATCATGTTATTGCAGAAGCCAGAAGAAATGGA
ATAAGGCTGATACTCAGCTTGGTTAACAATCTACAAGCATACGGTGGAAAGACTCAGTAT
GTAAAGTGGGCATGGGAAGAAGGTGTTGCTTTAAGCTCTTCCAATGATTCGTTCTTTTAT
GATCCATCGATCCGCCGTTATTTCAAAAATTATGTCAAGACAGTGCTAACAAGGAGGAAC
ATATACACCGGTATAGAGTACCGGGATGATCCGACCATATTTGCATGGGAGCTAATTAAT
GAACCTCGCTGCATGACCGATCCTTCTGGTGATACACTCCAGGACTGGATAGAAGAGATG
TCAACATTTGTGAAATCAATTGACAGGAAACATCTGCTCACCGTGGGCCTCGAAGGATTC
TATGGTCCTAAAAGTCCCAAAAAATCAATTGCCAATCCAGAAGTTTGGGCTGCTGATCTT
GGATCCGATTTTATCTGCAACTCTATACTTTCAACCGTTGATTTTGCCTCCGTACACGTG
TACCCAGACCATTGGTTTCACCACAAAAATTTTGAAGAGATGTTGAAATTTGCGGCCAAA
TGGATGCTTTCTCACATAGAAGACGGTGACAGGGAACTGAAAAAGCCAGTCCTGTTTACT
GAATTTGGTTTGTCAAATGATAACGAGGATTTTGAACCAGCTCAACGCGATAGATTCCTC
AAAATGGTTCTTGATGTTATATACAAGTCTGCAAAGAGAAACAGGTCCGGGGCAGGATCA
TTCTTCTGGCAATTCCTTGTAGAAAGAATGGAACGGTTCAATGACGAATATGGAATTGTT
CCATGGGAGAATCCATCAACATATCGATTAATTACAGATCAATCGTGTAGGCTGGCCAAA
GTTCAGGGACTACTGTCAACACAAGTTGAGCATTTAAAGAATTTTTGTGCCCCGAGGAAC
TAA

Peptide Sequence

PEP ID

XP_016490324.1
PEP Infomation

PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Nicotiana tabacum]
Sequence

MVKSSMSRMLAGNGLFYPIIGFASFIAFLYLSFGDLWVNYSKEINLSFVERNGTQFYVDG
KVFYVNGWNSYWLMDHAADYSTRPRIRTMLQASAKMGLTVCRTWAFNDGGYNALQISPGK
FDEKVFRALDHVIAEARRNGIRLILSLVNNLQAYGGKTQYVKWAWEEGVALSSSNDSFFY
DPSIRRYFKNYVKTVLTRRNIYTGIEYRDDPTIFAWELINEPRCMTDPSGDTLQDWIEEM
STFVKSIDRKHLLTVGLEGFYGPKSPKKSIANPEVWAADLGSDFICNSILSTVDFASVHV
YPDHWFHHKNFEEMLKFAAKWMLSHIEDGDRELKKPVLFTEFGLSNDNEDFEPAQRDRFL
KMVLDVIYKSAKRNRSGAGSFFWQFLVERMERFNDEYGIVPWENPSTYRLITDQSCRLAK
VQGLLSTQVEHLKNFCAPRN

Transcript Sequence

Gene sequence data has not been registered.